(1) Here, the amplitude of the eigenvector in the lowest-frequency mode is plotted on the ordinate whereas the abscissa shows the residue number.(2) Plotted on the abscissa of the graph are the incompatibility values or the proportions of informative sites incompatible with the particular clade in the set of artificially generated sequences.(3) That is to say, the intercepts on the abscissa and the ordinate should be higher for isocline 2 at x = 1.(4) To unify the curves to a single abscissa , we define a nominal maximal velocity for W / T e = 1, [beta] = 1, and y = 4.5.(5) Open and closed time histograms were plotted using a logarithmic abscissa and a square root ordinate and fitted to the sum of exponential functions by maximal likelihood using the program TACFit (Bruxton Corporation, Seattle, WA).
